Actionability Assertions

Gene Condition (MONDO ID) OMIM ID Final Assertion
No assertions found.

Actionability Assertion Rationale

  • This topic was initially scored prior to development of the process for making actionability assertions. The Actionability Working Group decided to defer making an assertion until after the topic could be reviewed through the update process.

Actionability Scores

Outcome / Intervention Pair Severity Likelihood Effectiveness Nature of Intervention Total Score
No scores were found.

Prevalence of the Genetic Condition

Biallelic RPE65 mutation-associated retinal dystrophy has been historically diagnosed phenotypically as Leber congenital amaurosis (LCA), non-syndromic autosomal recessive isolated retinitis pigmentosa (RP), and other various inherited retinal dystrophies (IRDs). LCA is estimated to affect 1 in 81,000 to 1 in 30,000 live births, with RPE65 accounting for 5-10% of these cases. RP affects 1 in 3,000 to 7,000 people, with autosomal recessive RP estimated to account for 5-20% of those cases. Of autosomal recessive RP cases, RPE65 accounts for about 2-5% of cases.
View Citations

Leber congenital amaurosis. Orphanet encyclopedia, ORPHA: 65., Retinitis pigmentosa. Orphanet encyclopedia, ORPHA: 791., Online Medelian Inheritance in Man. (2019) OMIM: 268000, Online Medelian Inheritance in Man. (2018) OMIM: 204000, AT Fahim, et al. (2000) NCBI: NBK1417, N Kumaran, et al. (2018) NCBI: NBK531510

Clinical Features (Signs / symptoms)

Biallelic RPE65 mutation-associated retinal dystrophy is a form of IRD caused by biallelic pathogenic variants in RPE65; it presents as a spectrum of disease with variable age of onset and progression of vision loss. Common clinical findings across the spectrum include night blindness, progressive loss of visual fields and loss of central vision. Biallelic RPE65 mutation-associated retinal dystrophy has been historically identified as multiple, heterogeneous diagnostic entities depending on the severity and age of onset. These clinical entities include, but are not limited to, LCA, RP, severe early childhood-onset retinal dystrophy (SECORD) and early-onset severe retinal dystrophy (EOSRD). LCA includes early onset severe retinal dystrophy, profound night blindness from birth, minimal nystagmus, and poor color discrimination; other features may include a blonde fundus and peripheral white, punctate lesions. RP can present with good central vision in the first decade of life, to the point where children may attend regular school during elementary years; at older ages visual acuity is greatly reduced. Fundus appearance depends on stage of disease. All phenotypes feature attenuated retinal vessels and a variable amount of retinal pigmentation in older patients and a reduced or nondetectable electroretinogram (ERG) at all ages. All phenotypic presentations can include cataracts. There is no universal agreement on the phenotypic classification of children with ambulatory vision who lose this useful vision within the first few years of life.
View Citations

Leber congenital amaurosis. Orphanet encyclopedia, ORPHA: 65., Retinitis pigmentosa. Orphanet encyclopedia, ORPHA: 791., Online Medelian Inheritance in Man. (2019) OMIM: 268000, Online Medelian Inheritance in Man. (2018) OMIM: 204000, AT Fahim, et al. (2000) NCBI: NBK1417, N Kumaran, et al. (2018) NCBI: NBK531510, Online Medelian Inheritance in Man. (2016) OMIM: 613794, Online Medelian Inheritance in Man. (2016) OMIM: 204100, Chung DC, et al. (2019) PMID: 30268864, Russell S, et al. (2017) PMID: 28712537

Natural History (Important subgroups & survival / recovery)

In LCA, night blindness often occurs from birth. Characteristically, these patients have residual cone-mediated vision in the first to third decades with progressive visual field loss until complete blindness is observed, most often in mid- to late-adulthood. A range of age of onset has been described for night blindness in RP, but it typically onsets in later childhood. Visual acuity disturbance and visual disability onset have reportedly occurred as late as the third decade, though can occur in childhood as well. Women with milder phenotypes have reported decreased vision during pregnancy that did not recover post-partum, though no objective data are available. A natural history chart review study was conducted on patients (n = 70) with confirmed biallelic RPE65 mutation-associated retinal dystrophy and various clinical diagnoses. In this cohort, the average age of first report for poor night vision was 12.0 (range, 2-43 years), although the study authors note the age of report in medical record may not reflect age of onset. Photophobia was reported at an average age of 17.27 years (range, 4-43 years). On average, visual acuity was markedly impaired but stable in the first decade of life, began to decrease around age 15-20, and decreased more rapidly after age 20, although some individuals had normal or near normal visual acuity at young ages. More than half of the patients were legally blind by United States criteria by age 18.
View Citations

Leber congenital amaurosis. Orphanet encyclopedia, ORPHA: 65., Retinitis pigmentosa. Orphanet encyclopedia, ORPHA: 791., Online Medelian Inheritance in Man. (2019) OMIM: 268000, Online Medelian Inheritance in Man. (2018) OMIM: 204000, AT Fahim, et al. (2000) NCBI: NBK1417, N Kumaran, et al. (2018) NCBI: NBK531510, Online Medelian Inheritance in Man. (2016) OMIM: 613794, Online Medelian Inheritance in Man. (2016) OMIM: 204100, Chung DC, et al. (2019) PMID: 30268864

Description of sources of evidence:

Tier 1: Evidence from a systematic review or a meta-analysis or clinical practice guideline clearly based on a systematic review.
Tier 2: Evidence from clinical practice guidelines or broad-based expert consensus with non-systematic evidence review.
Tier 3: Evidence from another source with non-systematic review of evidence with primary literature cited.
Tier 4: Evidence from another source with non-systematic review of evidence with no citations to primary data sources.
Tier 5: Evidence from a non-systematically identified source.

Mode of Inheritance

Autosomal Recessive

Biallelic RPE65-associated retinal dystrophy can be inherited in a homozygous or compound heterozygous fashion.

View Citations

AT Fahim, et al. (2000) NCBI: NBK1417, N Kumaran, et al. (2018) NCBI: NBK531510, Online Medelian Inheritance in Man. (2016) OMIM: 613794, Online Medelian Inheritance in Man. (2016) OMIM: 204100

Prevalence of Genetic Variants

Unknown
No population prevalence of RPE65 pathogenic variants has been reported.
Of the population of individuals with LCA, about 5-10% of these are accounted for by biallelic RPE65 pathogenic variants.
Tier 3 View Citations

N Kumaran, et al. (2018) NCBI: NBK531510

Of the population of individuals with recessive RP, about 2-5% are accounted for by biallelic RPE65 pathogenic variants.
Tier 3 View Citations

AT Fahim, et al. (2000) NCBI: NBK1417, Online Medelian Inheritance in Man. (2016) OMIM: 613794

Penetrance (Includes any high-risk racial or ethnic subgroups)

Unknown
About 50% of patients with RP (genotype not specified) develop cataracts requiring lens extraction.
Tier 4 View Citations

AT Fahim, et al. (2000) NCBI: NBK1417

In a retrospective chart review study of a cohort of 70 patients with confirmed biallelic RPE65 mutation-associated inherited retinal disease, a total of 14 (20.0%) subjects had cataracts or other lens opacities/abnormalities in at least 1 eye; of those 14 subjects, 11 (78.5%) had bilateral lens abnormalities. The mean age of subjects at the time the first lens abnormality was approximately 26 years.
Tier 5 View Citations

Chung DC, et al. (2019) PMID: 30268864

>= 40 %
The penetrance of RPE65 biallelic variants was reported in two families with a clinical phenotype of LCA. The families contained a combined total of 10 affected and 37 unaffected members, several of whom were genotyped. The 8 affected members that were sequenced had one of two homozygous pathogenic variants, whereas all evaluated unaffected family members were either heterozygous or wildtype, suggesting near 100% penetrance for the variants examined when inherited in a biallelic fashion.
Tier 5 View Citations

Li Y, et al. (2009) PMID: 18936139

>= 40 %
In a retrospective chart review study of a cohort of 70 patients with confirmed biallelic RPE65 mutation-associated inherited retinal disease, poor night vision was reported in 54.3% of patient charts, 88.6% reported photophobia, and 78.6% reported nystagmus. More than half of the cohort were legally blind by US standards by age 18 years and all individuals age 32 or greater were legally blind.
Tier 5 View Citations

Chung DC, et al. (2019) PMID: 30268864

Expressivity

The same homozygous pathogenic variant has been reported to result in both mild and severe phenotypes, suggesting variable expressivity.
Tier 4 View Citations

Online Medelian Inheritance in Man. (2016) OMIM: 613794

A retrospective chart review study failed to find any clear correlations between molecular diagnosis (pathogenic variant) and clinical diagnostic entity/phenotype (e.g., RP vs LCA).
Tier 5 View Citations

Chung DC, et al. (2019) PMID: 30268864

Description of sources of evidence:

Tier 1: Evidence from a systematic review or a meta-analysis or clinical practice guideline clearly based on a systematic review.
Tier 2: Evidence from clinical practice guidelines or broad-based expert consensus with non-systematic evidence review.
Tier 3: Evidence from another source with non-systematic review of evidence with primary literature cited.
Tier 4: Evidence from another source with non-systematic review of evidence with no citations to primary data sources.
Tier 5: Evidence from a non-systematically identified source.

Patient Management

While guidelines did make note of the availability of the now FDA-approved gene therapy for RPE65 gene therapy, they did not make specific recommendations.
Tier 3 View Citations

AT Fahim, et al. (2000) NCBI: NBK1417, N Kumaran, et al. (2018) NCBI: NBK531510

In December 2017, the FDA approved LUXTURNA (voretigene neparvovec-rzyl) gene therapy for the treatment of patients with confirmed biallelic RPE65 mutation-associated retinal dystrophy. The FDA’s conclusion of efficacy is based on improvement in a functional vision score over 1 year in a single open-label controlled Phase 3 study of 31 affected patients. The average age of the 31 randomized patients was 15 years (range 4 to 44 years), including 64% pediatric subjects (n=20, age from 4 to 17 years) and 36% adults (n=11). Functional vision was scored by a patient’s ability to navigate a course in various luminance levels. Using both treated eyes of the 21 subjects in the LUXTURNA treatment group, 11 (52%) had a clinically meaningful score improvement, while only one of the ten (10%) subjects in the control group had a clinically meaningful score improvement. Using the first treated eye only, 15/21 (71%) had a clinically meaningful score improvement, while no comparable score improvement was observed in controls. Other secondary clinical outcomes were also examined. Analysis of white light full-field light sensitivity threshold testing showed statistically significant improvement at 1 year in the LUXTURNA treatment group compared to the control group. The change in visual acuity was not significantly different between the LUXTURNA and control groups.
Tier 5 View Citations

Russell S, et al. (2017) PMID: 28712537, (2017) URL: www.fda.gov.

Surveillance

Periodic ophthalmic evaluation and assessment of the presence of amblyopia, glaucoma, or cataract should be performed. Generally Goldmann visual field perimetry (GVF) or full-field static perimetry and a full ophthalmoscopic examination with dilation are performed on an annual basis, with more frequent follow up for active complications such as cystoid macular edema.
Tier 4 View Citations

Leber congenital amaurosis. Orphanet encyclopedia, ORPHA: 65., AT Fahim, et al. (2000) NCBI: NBK1417

Circumstances to Avoid

Vitamin E may adversely affect the course of disease and so high-dose supplements should be avoided.
Tier 3 View Citations

AT Fahim, et al. (2000) NCBI: NBK1417

Avoidance of smoking is recommended because it is thought to contribute to retinal damage in IRDs and is a risk factor for age-related macular degeneration.
Tier 4 View Citations

AT Fahim, et al. (2000) NCBI: NBK1417

Repeated poking and pressing on the eyes should be discouraged.
Tier 4 View Citations

Leber congenital amaurosis. Orphanet encyclopedia, ORPHA: 65.

Because of the concern of acceleration of retinal degeneration from short wavelength light exposure in RP, use of UV-A and UV-B blocking sunglasses and avoidance of bright light is recommended. This recommendation is based only on animal model studies demonstrating impacts of light exposure.
Tier 3 View Citations

Retinitis pigmentosa. Orphanet encyclopedia, ORPHA: 791., AT Fahim, et al. (2000) NCBI: NBK1417

Description of sources of evidence:

Tier 1: Evidence from a systematic review or a meta-analysis or clinical practice guideline clearly based on a systematic review.
Tier 2: Evidence from clinical practice guidelines or broad-based expert consensus with non-systematic evidence review.
Tier 3: Evidence from another source with non-systematic review of evidence with primary literature cited.
Tier 4: Evidence from another source with non-systematic review of evidence with no citations to primary data sources.
Tier 5: Evidence from a non-systematically identified source.

Nature of Intervention

LUXTURNA is administered subretinally by injection. Per the FDA package insert, the most common adverse reactions (incidence ≥ 5%) in the clinical trials for LUXTURNA included conjunctival hyperemia, cataract, increased intraocular pressure, retinal tear, dellen (thinning of the corneal stroma), and macular hole. Several other ocular adverse effects were also reported, including risk of endophthalmitis. Safety data was included on the basis of 41 patients (81 eyes).
Context: Pediatric
View Citations

(2017) URL: www.fda.gov.

Chance to Escape Clinical Detection

Patients with RP present at older ages and the earliest signs of disease (e.g., night blindness) often are not the symptom that causes the patient to seek treatment.
Context: Pediatric
Tier 3 View Citations

AT Fahim, et al. (2000) NCBI: NBK1417

Although mid-peripheral vision loss occurs early in the RP phenotype, it is rarely recognized by the affected individual and is usually not a presenting symptom. Affected individuals may be misconstrued as "clumsy" before constriction of visual fields.
Context: Pediatric
Tier 4 View Citations

AT Fahim, et al. (2000) NCBI: NBK1417

Description of sources of evidence:

Tier 1: Evidence from a systematic review or a meta-analysis or clinical practice guideline clearly based on a systematic review.
Tier 2: Evidence from clinical practice guidelines or broad-based expert consensus with non-systematic evidence review.
Tier 3: Evidence from another source with non-systematic review of evidence with primary literature cited.
Tier 4: Evidence from another source with non-systematic review of evidence with no citations to primary data sources.
Tier 5: Evidence from a non-systematically identified source.
Gene Condition Associations
OMIM Identifier Primary MONDO Identifier Additional MONDO Identifiers

References List

AT Fahim, SP Daiger, RG Weleber. Nonsyndromic Retinitis Pigmentosa Overview. (2000) [Updated Jan 19 2017]. In: MP Adam, HH Ardinger, RA Pagon, et al., editors. GeneReviews® [Internet]. Seattle (WA): University of Washington, Seattle; 1993-2026. Available from: https://www.ncbi.nlm.nih.gov/books/NBK1417/

Chung DC, Bertelsen M, Lorenz B, Pennesi ME, Leroy BP, Hamel CP, Pierce E, Sallum J, Larsen M, Stieger K, Preising M, Weleber R, Yang P, Place E, Liu E, Schaefer G, DiStefano-Pappas J, Elci OU, McCague S, Wellman JA, High KA, Reape KZ. (2019) The Natural History of Inherited Retinal Dystrophy Due to Biallelic Mutations in the RPE65 Gene. American journal of ophthalmology. 199(1879-1891):58-70.

LEBER CONGENITAL AMAUROSIS 1; LCA1. Online Medelian Inheritance in Man, OMIM®. Johns Hopkins University, Baltimore, MD. MIM: 204000, (2018) World Wide Web URL: http://omim.org/

LEBER CONGENITAL AMAUROSIS 2; LCA2. Online Medelian Inheritance in Man, OMIM®. Johns Hopkins University, Baltimore, MD. MIM: 204100, (2016) World Wide Web URL: http://omim.org/

Leber congenital amaurosis. Orphanet encyclopedia, http://www.orpha.net/consor/cgi-bin/OC_Exp.php?lng=en&Expert=65

Li Y, Wang H, Peng J, Gibbs RA, Lewis RA, Lupski JR, Mardon G, Chen R. (2009) Mutation survey of known LCA genes and loci in the Saudi Arabian population. Investigative ophthalmology & visual science. 50(3):1336-43.

LUXTURNA (voretigene neparvovec-rzyl) [package insert]. Publisher: Spark Therapeutics, Inc (2017) Accessed: 2018-12-18. URL: https://www.fda.gov/downloads/biologicsbloodvaccines/cellulargenetherapyproducts/approvedproducts/ucm589541.pdf

N Kumaran, ME Pennesi, P Yang, KM Trzupek, C Schlechter, AT Moore, RG Weleber, M Michaelides. Leber Congenital Amaurosis / Early-Onset Severe Retinal Dystrophy Overview. (2018) . In: MP Adam, HH Ardinger, RA Pagon, et al., editors. GeneReviews® [Internet]. Seattle (WA): University of Washington, Seattle; 1993-2026. Available from: https://www.ncbi.nlm.nih.gov/books/NBK531510/

RETINITIS PIGMENTOSA 20; RP20. Online Medelian Inheritance in Man, OMIM®. Johns Hopkins University, Baltimore, MD. MIM: 613794, (2016) World Wide Web URL: http://omim.org/

RETINITIS PIGMENTOSA; RP. Online Medelian Inheritance in Man, OMIM®. Johns Hopkins University, Baltimore, MD. MIM: 268000, (2019) World Wide Web URL: http://omim.org/

Retinitis pigmentosa. Orphanet encyclopedia, http://www.orpha.net/consor/cgi-bin/OC_Exp.php?lng=en&Expert=791

Russell S, Bennett J, Wellman JA, Chung DC, Yu ZF, Tillman A, Wittes J, Pappas J, Elci O, McCague S, Cross D, Marshall KA, Walshire J, Kehoe TL, Reichert H, Davis M, Raffini L, George LA, Hudson FP, Dingfield L, Zhu X, Haller JA, Sohn EH, Mahajan VB, Pfeifer W, Weckmann M, Johnson C, Gewaily D, Drack A, Stone E, Wachtel K, Simonelli F, Leroy BP, Wright JF, High KA, Maguire AM. (2017) Efficacy and safety of voretigene neparvovec (AAV2-hRPE65v2) in patients with RPE65-mediated inherited retinal dystrophy: a randomised, controlled, open-label, phase 3 trial. Lancet (London, England). 390(10097):849-860.

Early Rule-Out Summary

This topic passed the early rule out stage

Findings of Early Rule-Out Assessment

  1. Is there a qualifying resource, such as a practice guideline or systematic review, for the genetic condition?
  2. Does the practice guideline or systematic review indicate that the result is actionable in one or more of the following ways?
  3. a. Patient Management

    b. Surveillance or Screening

    c. Circumstances to Avoid

  4. Is there an intervention that is initiated during childhood (<18 years of age) in an undiagnosed child with the genetic condition?
  5. Does the disease present outside of the neonatal period?
  6. Is this condition an important health problem?
  7. Is there at least on known pathogenic variant with at least moderate penetrance (≥40%) or moderate relative risk (≥2) in any population?