Actionability Assertions

Gene Condition (MONDO ID) OMIM ID Final Assertion
WAS X-linked severe congenital neutropenia (0010294) 300299 Moderate Actionability
WAS Wiskott-Aldrich syndrome (0010518) 301000 Moderate Actionability
WAS thrombocytopenia 1 (0010743) 313900 Moderate Actionability

Actionability Assertion Rationale

  • All experts agreed with the assertion computed according to the rubric. This assertion only applies to males due to the X-linked nature of the condition.

Actionability Scores

Outcome / Intervention Pair Severity Likelihood Effectiveness Nature of Intervention Total Score
WAS-related morbidity and mortality (males only) / Referral to hematology for clinical scoring of WAS-related conditions to determine treatment 2 3C 2C 2 9CC
View scoring key
Domain of Actionability Scoring Metric State of the Knowledgebase
Severity: What is the nature of the threat to health to an individual? 3 = Sudden death as a reasonably possible outcome
2 = Reasonable possibility of death or major morbidity
1 = Modest morbidity
0 = Minimal or no morbidity
N/A
Likelihood: What is the chance that the outcome will occur? 3 = >40% chance
2 = 5%-39% chance
1 = 1%-4% chance
0 = <1% chance
A = Substantial evidence or evidence from a high tier (tier 1)
B = Moderate evidence or evidence from a moderate tier (tier 2)
C = Minimal evidence or evidence from a lower tier (tier 3 or 4)
D = Poor evidence or evidence not provided in the report
N = Evidence based on expert contributions (tier 5)
Effectiveness: What is the effectiveness of a specific intervention in preventing or diminishing the risk of harm? 3 = Highly effective
2 = Moderately effective
1 = Minimally effective
0 = Controversial or unknown effectiveness
IN = Ineffective/No interventiona
A = Substantial evidence or evidence from a high tier (tier 1)
B = Moderate evidence or evidence from a moderate tier (tier 2)
C = Minimal evidence or evidence from a lower tier (tier 3 or 4)
D = Poor evidence or evidence not provided in the report
N = Evidence based on expert contributions (tier 5)
Nature of intervention: How risky, medically burdensome, or intensive is the intervention? 3 = Low risk, or medically acceptable and low intensity
2 = Moderate risk, moderately acceptable or intensive
1 = Greater risk, less acceptable and substantial intensity
0 = High risk, poorly acceptable or intensive
N/A
a Do not score the remaining categories

Prevalence of the Genetic Condition

WAS-related disorders include Wiskott-Aldrich syndrome (WAS), X-linked thrombocytopenia (XLT), and X-linked congenital neutropenia (XLN). The estimated incidence of all WAS-related disorders is 1-4/1,000,000 live male births. The disorders occur worldwide with no racial or ethnic predilection. The incidence of WAS has been estimated as less than 1/100,000 live births, with a prevalence range of 1-9/1,000,000. Information on the prevalence of XLT was not available but assumed to be rare. XLN is rare, with prevalence estimated as <1/1,000,000.
View Citations

S Chandra, et al. (2004) NCBI: NBK1178, X-linked severe congenital neutropenia. Orphanet encyclopedia, ORPHA: 86788., Wiskott-Aldrich syndrome. Orphanet encyclopedia, ORPHA: 906.

Clinical Features (Signs / symptoms)

WAS-related disorders are a spectrum of disorders resulting from deficiency of the WAS protein (WASP) that leads to a deficiency of hematopoietic cells, with predominant defects of platelets and lymphocytes. WAS: Affected males have thrombocytopenia with intermittent mucosal bleeding, bloody diarrhea, and intermittent or chronic petechiae and purpura. Eczema and recurrent bacterial and viral infections, particularly of the ear, are also seen. Infections by opportunistic agents, such as Epstein Barr virus (EBV), are common. Roughly 25-40% of those who survive early complications develop one or more autoimmune conditions, including hemolytic anemia, immune thrombocytopenic purpura, immune-mediated neutropenia, rheumatoid arthritis, vasculitis, and immune-mediated damage to the kidneys and liver. Individuals, particularly those who have been exposed to EBV, are at increased risk of developing lymphomas, which often occur in unusual, extranodal locations including the brain, lung, or gastrointestinal tract. XLT: XLT is an attenuated form of WAS. Males have thrombocytopenia with small platelets that may be intermittent and a bleeding tendency. Other complications of WAS, including eczema, immune dysfunction, and risk of malignancy, are usually mild or absent. XLN: Males have congenital neutropenia, myelodysplasia, increased myeloid cell apoptosis, and lymphoid cell abnormalities. Major bacterial infections are also recurrent.
View Citations

S Chandra, et al. (2004) NCBI: NBK1178, X-linked severe congenital neutropenia. Orphanet encyclopedia, ORPHA: 86788., Wiskott-Aldrich syndrome. Orphanet encyclopedia, ORPHA: 906., Online Medelian Inheritance in Man. (2017) OMIM: 301000, Donadieu J, et al. (2011) PMID: 21595885, Online Medelian Inheritance in Man. (2010) OMIM: 303900

Natural History (Important subgroups & survival / recovery)

WAS-related disorders are usually present in infancy. The phenotypic spectrum ranges from severe to mild. However, because the clinical phenotype may worsen with age, it is particularly difficult to predict eventual disease severity in an infant. The prognosis of WAS-related disorders has improved in the last 20 years as a result of improved treatment.WAS: Thrombocytopenia is usually present at birth, though cases of near-normal platelet counts in the newborn period followed by chronic thrombocytopenia have been reported. Intracranial bleeding is a potential early life-threatening complication. Life-threatening bleeding occurs in 30% of males prior to diagnosis. The risk of developing an autoimmune disorder increases with age, and the risk of developing lymphoma increases with age and in the presence of an autoimmune disorder. Approximately 13% of individuals develop lymphoma at an average age of 9.5 years. The reported median survival of children who do not undergo successful allogeneic hematopoietic cell transplantation (HCT) is 8-14.5 years. The causes of non-HCT-related deaths include infection (44%), malignancy (26%), and bleeding (23%).XLT: Life expectancy may not be significantly affected in males as a group; however, severe disease-related events including life-threatening infections, bleeding, autoimmune diseases, and malignancies are common. XLN: Several complications can occur with congenital neutropenia, including infectious complications. An estimated 20-30% of males are at risk of myelodysplastic syndrome or acute myeloid leukemia (AML). Some cases are only diagnosed in adulthood, implying that some patients have limited infectious complications.WAS scores (0-5 range) facilitate clinical categorization and may predict disease severity. It is based on clinical parameters, such as the presence of thrombocytopenia, eczema, immunodeficiency, autoimmunity, and malignancy. As progression of the disease can occur at a later age, individuals may transition from a lower to a higher WAS score.Female carriers of a WAS pathogenic variant are usually asymptomatic and have no immunologic or biochemical markers of the disorder, though mild thrombocytopenia has been noted in a small proportion. In rare cases, female carriers may be symptomatic; blood cell populations can vary depending on with either normal or abnormal WASP expression or skewed X-chromosome inactivation that favors expression of the mutated allele.
View Citations

S Chandra, et al. (2004) NCBI: NBK1178, Wiskott-Aldrich syndrome. Orphanet encyclopedia, ORPHA: 906., Online Medelian Inheritance in Man. (2017) OMIM: 301000, Donadieu J, et al. (2011) PMID: 21595885

Description of sources of evidence:

Tier 1: Evidence from a systematic review or a meta-analysis or clinical practice guideline clearly based on a systematic review.
Tier 2: Evidence from clinical practice guidelines or broad-based expert consensus with non-systematic evidence review.
Tier 3: Evidence from another source with non-systematic review of evidence with primary literature cited.
Tier 4: Evidence from another source with non-systematic review of evidence with no citations to primary data sources.
Tier 5: Evidence from a non-systematically identified source.

Mode of Inheritance

X-linked

Prevalence of Genetic Variants

< 1-2 in 100000
Pathogenic variants in WAS account for all cases of WAS-associated disorders.
Tier 3 View Citations

S Chandra, et al. (2004) NCBI: NBK1178

Penetrance (Includes any high-risk racial or ethnic subgroups)

>= 40 %
Penetrance is complete in males with a WAS pathogenic variant.
Tier 4 View Citations

S Chandra, et al. (2004) NCBI: NBK1178

5-39 %
27% of children with WAS have the triad of (1) bloody diarrhea, mucosal bleeding and/or petechiae; (2) eczema; and (3) recurrent middle-ear infections and purulent drainage from the ears.
Tier 3 View Citations

S Chandra, et al. (2004) NCBI: NBK1178

>= 40 %
25-40% of males who survive the early complications of WAS develop one or more autoimmune conditions.
Tier 3 View Citations

S Chandra, et al. (2004) NCBI: NBK1178

>= 40 %
Eczema occurs in about 80% of males with WAS.
Tier 3 View Citations

S Chandra, et al. (2004) NCBI: NBK1178

5-39 %
Approximately 13% of individuals with WAS develop lymphoma.
Tier 4 View Citations

S Chandra, et al. (2004) NCBI: NBK1178

5-39 %
It is estimated that 20-30% of males with XLN are at risk of myelodysplastic syndrome or AML.
Tier 3 View Citations

S Chandra, et al. (2004) NCBI: NBK1178

Expressivity

The range of clinical complications experienced by affected males can vary widely, even in the same kindred. In some families, adult males in their 60s have mild manifestations such as chronic thrombocytopenia, whereas other affected male relatives succumb from complications of severe manifestations in infancy and childhood.
Tier 3 View Citations

S Chandra, et al. (2004) NCBI: NBK1178

Description of sources of evidence:

Tier 1: Evidence from a systematic review or a meta-analysis or clinical practice guideline clearly based on a systematic review.
Tier 2: Evidence from clinical practice guidelines or broad-based expert consensus with non-systematic evidence review.
Tier 3: Evidence from another source with non-systematic review of evidence with primary literature cited.
Tier 4: Evidence from another source with non-systematic review of evidence with no citations to primary data sources.
Tier 5: Evidence from a non-systematically identified source.

Patient Management

The following evaluations following initial diagnosis are appropriate:

• Referral to immunologist for management

• Platelet count and size

• T-cell subsets

• Immunoglobulin levels.

Tier 4 View Citations

S Chandra, et al. (2004) NCBI: NBK1178

HCT is the only curative treatment clinically available for WAS. Males with a WAS score 3-5, have markedly decreased WASP expression, and have a suitably matched donor are candidates for HCT. Five-year survival rates for HCT performed since 2000 are as high as 92%, with increased survival associated with HCT from a matched healthy sib or closely matched unrelated donor and earlier age of the procedure. Some symptoms (e.g., autoimmune disease) may take months to resolve following complete engraftment.
Tier 3 View Citations

S Chandra, et al. (2004) NCBI: NBK1178

Given persistent morbidity, HCT may be considered in XLT if an HLA–identical donor can be identified. However, HCT in XLT (WAS score 1-2) is controversial and should be decided on an individual basis.
Tier 4 View Citations

S Chandra, et al. (2004) NCBI: NBK1178

For XLN, HCT can permanently correct the neutropenia, though treatment is only recommended on a case by case basis when granulocyte colony-stimulating factor (G-CSF) therapy is not effective.
Tier 4 View Citations

Donadieu J, et al. (2011) PMID: 21595885

Treatment of XLN includes G-CSF to correct the neutropenia. No long-term randomized controlled trials have been published on effectiveness. However, a randomized study of 120 patients with severe neutropenia demonstrated a significantly increased proportion of maturing neutrophils and significantly decreased infection-related events, with an approximately 50% reduction in incidence and duration of infection-related events and almost 70% reduction in duration of antibiotic use.
Tier 4 View Citations

S Chandra, et al. (2004) NCBI: NBK1178

For individuals with WAS with clinical signs or symptoms of infection, prompt evaluation and treatment is necessary. The initiation of empiric parenteral antibiotic treatment is necessary in the majority of individuals. The evaluation should be exhaustive until the source of the infection is uncovered. This may include invasive assessments, as cultures and isolation of the offending organism should be sought in order to guide therapy.
Tier 4 View Citations

S Chandra, et al. (2004) NCBI: NBK1178, Donadieu J, et al. (2011) PMID: 21595885

Use of antibiotic prophylaxis to prevent infections depends on the individual risk, history, and severity. Antibiotic prophylaxis for pneumonia secondary to Pneumocystis jiroveci, formerly known as Pneumocystis carinii (PCP), is indicated for infants with WAS as they are at risk of developing PCP.
Tier 4 View Citations

S Chandra, et al. (2004) NCBI: NBK1178, Wiskott-Aldrich syndrome. Orphanet encyclopedia, ORPHA: 906., Donadieu J, et al. (2011) PMID: 21595885

Immunoglobulin replacement therapy (IVIgG, a highly purified blood derivative) prevents infections. It is administered by age six months intravenously every three to four weeks or subcutaneously, usually on a weekly basis.
Tier 4 View Citations

S Chandra, et al. (2004) NCBI: NBK1178, Wiskott-Aldrich syndrome. Orphanet encyclopedia, ORPHA: 906.

Surveillance

Regular follow-up is indicated to monitor blood counts, adequacy of the IVIgG replacement therapy, and other potential complications.
Tier 4 View Citations

S Chandra, et al. (2004) NCBI: NBK1178

Circumstances to Avoid

Live vaccines for routine childhood immunizations should be avoided. Other “non-live” vaccinations can be given safely to individuals with a WAS-related disorder but may not generate protective levels of antibody.
Tier 4 View Citations

S Chandra, et al. (2004) NCBI: NBK1178

Circumcision of an at-risk newborn male should not be undertaken in the presence of thrombocytopenia.
Tier 4 View Citations

S Chandra, et al. (2004) NCBI: NBK1178

The use of over-the-counter medications should be discussed with a physician as some medications can interfere with platelet function.
Tier 4 View Citations

S Chandra, et al. (2004) NCBI: NBK1178

When possible, elective surgical procedures should be deferred until after HCT.
Tier 4 View Citations

S Chandra, et al. (2004) NCBI: NBK1178

For patients with WAS, treatments that can weaken the immune system (steroids, splenectomy, immunosuppressive agents) should be used with the highest caution by trained medical staff.
Tier 4 View Citations

Wiskott-Aldrich syndrome. Orphanet encyclopedia, ORPHA: 906.

Description of sources of evidence:

Tier 1: Evidence from a systematic review or a meta-analysis or clinical practice guideline clearly based on a systematic review.
Tier 2: Evidence from clinical practice guidelines or broad-based expert consensus with non-systematic evidence review.
Tier 3: Evidence from another source with non-systematic review of evidence with primary literature cited.
Tier 4: Evidence from another source with non-systematic review of evidence with no citations to primary data sources.
Tier 5: Evidence from a non-systematically identified source.

Nature of Intervention

Interventions include HCT, G-CSF, aggressive treatment of infections, prophylactic antibiotic use, IVIgG, and circumstances to avoid.\n\nHCT is associated with significant risk of morbidity and mortality. In a study of 194 patients with WAS who received HCT, 45.9% of patients experienced complications within the first year, which included primary graft failure or graft rejection, autoimmune manifestations, infection requiring hospitalization, and neurological complications. \n\nG-CSF is administered daily subcutaneously. Tolerability of G-CSF is good or excellent, with frequently reported adverse events frequently reported including bone pain, headache, and rash, which are generally mild and manageable.
Context: Pediatric
View Citations

S Chandra, et al. (2004) NCBI: NBK1178, Donadieu J, et al. (2011) PMID: 21595885

Chance to Escape Clinical Detection

Life-threatening bleeding occurs in 30% of males prior to a diagnosis of WAS.
Context: Pediatric
Tier 3 View Citations

S Chandra, et al. (2004) NCBI: NBK1178

Description of sources of evidence:

Tier 1: Evidence from a systematic review or a meta-analysis or clinical practice guideline clearly based on a systematic review.
Tier 2: Evidence from clinical practice guidelines or broad-based expert consensus with non-systematic evidence review.
Tier 3: Evidence from another source with non-systematic review of evidence with primary literature cited.
Tier 4: Evidence from another source with non-systematic review of evidence with no citations to primary data sources.
Tier 5: Evidence from a non-systematically identified source.
Gene Condition Associations
OMIM Identifier Primary MONDO Identifier Additional MONDO Identifiers
WAS 300299 0010294
WAS 301000 0010518
WAS 313900 0010743

References List

COLORBLINDNESS, PARTIAL, PROTAN SERIES; CBP. Online Medelian Inheritance in Man, OMIM®. Johns Hopkins University, Baltimore, MD. MIM: 303900, (2010) World Wide Web URL: http://omim.org/

Donadieu J, Fenneteau O, Beaupain B, Mahlaoui N, Chantelot CB. (2011) Congenital neutropenia: diagnosis, molecular bases and patient management. Orphanet journal of rare diseases. 6(1750-1172):26.

S Chandra, L Bronicki, CB Nagaraj, K Zhang. WAS-Related Disorders. (2004) [Updated Sep 22 2016]. In: MP Adam, HH Ardinger, RA Pagon, et al., editors. GeneReviews® [Internet]. Seattle (WA): University of Washington, Seattle; 1993-2026. Available from: https://www.ncbi.nlm.nih.gov/books/NBK1178/

WISKOTT-ALDRICH SYNDROME; WAS. Online Medelian Inheritance in Man, OMIM®. Johns Hopkins University, Baltimore, MD. MIM: 301000, (2017) World Wide Web URL: http://omim.org/

Wiskott-Aldrich syndrome. Orphanet encyclopedia, http://www.orpha.net/consor/cgi-bin/OC_Exp.php?lng=en&Expert=906

X-linked severe congenital neutropenia. Orphanet encyclopedia, http://www.orpha.net/consor/cgi-bin/OC_Exp.php?lng=en&Expert=86788

Early Rule-Out Summary

This topic did not pass the early rule out stage due to insufficient evidence for actionability. However, the Actionability Working Group discussed and granted an exception to move this topic forward for a full evidence curation and summary report.

Findings of Early Rule-Out Assessment

  1. Is there a qualifying resource, such as a practice guideline or systematic review, for the genetic condition?
  2. Does the practice guideline or systematic review indicate that the result is actionable in one or more of the following ways?
  3. a. Patient Management

    b. Surveillance or Screening

    c. Circumstances to Avoid

  4. Is there an intervention that is initiated during childhood (<18 years of age) in an undiagnosed child with the genetic condition?
  5. Does the disease present outside of the neonatal period?
  6. Is this condition an important health problem?
  7. Is there at least on known pathogenic variant with at least moderate penetrance (≥40%) or moderate relative risk (≥2) in any population?