Actionability Assertions

Gene Condition (MONDO ID) OMIM ID Final Assertion
No assertions found.

Actionability Assertion Rationale

  • This topic was initially scored prior to development of the process for making actionability assertions. The Actionability Working Group decided to defer making an assertion until after the topic could be reviewed through the update process.

Actionability Scores

Outcome / Intervention Pair Severity Likelihood Effectiveness Nature of Intervention Total Score
Morbidity from methylmalonic aciduria / Protein restriction (Vitamin B12 responsive) 2 3D 1C 2 8DC
Morbidity from methylmalonic aciduria / Monitor kidney function (Vitamin B12 responsive) 2 3D 2D 3 10DD
Morbidity from methylmalonic aciduria / Vitamin B12 (Vitamin B12 responsive) 2 3D 2C 3 10DC
Morbidity from methylmalonic aciduria / Protein restriction (Vitamin B12 non - responsive) 2 3D 1C 2 8DC
Morbidity from methylmalonic aciduria / Monitor kidney function (Vitamin B12 non - responsive) 2 3D 2D 3 10DD
View scoring key
Domain of Actionability Scoring Metric State of the Knowledgebase
Severity: What is the nature of the threat to health to an individual? 3 = Sudden death as a reasonably possible outcome
2 = Reasonable possibility of death or major morbidity
1 = Modest morbidity
0 = Minimal or no morbidity
N/A
Likelihood: What is the chance that the outcome will occur? 3 = >40% chance
2 = 5%-39% chance
1 = 1%-4% chance
0 = <1% chance
A = Substantial evidence or evidence from a high tier (tier 1)
B = Moderate evidence or evidence from a moderate tier (tier 2)
C = Minimal evidence or evidence from a lower tier (tier 3 or 4)
D = Poor evidence or evidence not provided in the report
N = Evidence based on expert contributions (tier 5)
Effectiveness: What is the effectiveness of a specific intervention in preventing or diminishing the risk of harm? 3 = Highly effective
2 = Moderately effective
1 = Minimally effective
0 = Controversial or unknown effectiveness
IN = Ineffective/No interventiona
A = Substantial evidence or evidence from a high tier (tier 1)
B = Moderate evidence or evidence from a moderate tier (tier 2)
C = Minimal evidence or evidence from a lower tier (tier 3 or 4)
D = Poor evidence or evidence not provided in the report
N = Evidence based on expert contributions (tier 5)
Nature of intervention: How risky, medically burdensome, or intensive is the intervention? 3 = Low risk, or medically acceptable and low intensity
2 = Moderate risk, moderately acceptable or intensive
1 = Greater risk, less acceptable and substantial intensity
0 = High risk, poorly acceptable or intensive
N/A
a Do not score the remaining categories

Prevalence of the Genetic Condition

Prevalence of methylmalonic aciduria (MMA) has been estimated between 1/50,000 to 1/100,000.
View Citations

Methylmalonic acidemia without homocystinuria. Orphanet encyclopedia, ORPHA: 293355., I Manoli, et al. (2005) NCBI: NBK1231

Clinical Features (Signs / symptoms)

MMA is an inborn error of vitamin B12 metabolism characterized by gastrointestinal and neurometabolic manifestations resulting from decreased function of the mitochondrial enzyme methylmalonyl-CoA mutase. Clinical signs, which typically present neonatally or during infancy, include lethargy, failure to thrive, recurrent vomiting, dehydration, respiratory distress, and muscle hypotonia, as well as developmental delay, intellectual disability, hepatomegaly and coma. Longterm consequences of the disorder include neurological damage due to metabolic stroke affecting the brain stem, and end stage renal failure. The adult or “benign” form of MMA is associated with a mildly increased urinary excretion of methylmalonate, but it is uncertain if some of these individuals will develop symptoms. This form of MA is not well understood, though patients are typically viewed as stable, but may be prone to acute metabolic decompensation.
View Citations

Methylmalonic acidemia without homocystinuria. Orphanet encyclopedia, ORPHA: 293355., I Manoli, et al. (2005) NCBI: NBK1231

Natural History (Important subgroups & survival / recovery)

Onset ranges from the neonatal period to adulthood. The most common MMA phenotype presents during infancy where infants are normal at birth, but rapidly develop clinical manifestations. All phenotypes demonstrate periods of relative health and intermittent metabolic decompensation, usually associated with intercurrent infections and stress. Survival expectancy depends on the MMA subtype.
View Citations

I Manoli, et al. (2005) NCBI: NBK1231

Description of sources of evidence:

Tier 1: Evidence from a systematic review or a meta-analysis or clinical practice guideline clearly based on a systematic review.
Tier 2: Evidence from clinical practice guidelines or broad-based expert consensus with non-systematic evidence review.
Tier 3: Evidence from another source with non-systematic review of evidence with primary literature cited.
Tier 4: Evidence from another source with non-systematic review of evidence with no citations to primary data sources.
Tier 5: Evidence from a non-systematically identified source.

Mode of Inheritance

Autosomal Recessive

Prevalence of Genetic Variants

1-2 in 50000
Virtually all cases are attributed to a mutation in MUT, MMA, MMAB, MCEE, or MMADHC. Thus the prevalence of genetic mutations should be similar to prevalence estimates for methylmalonic aciduria (between 1/50,000 to 1/100,000).
Tier 4 View Citations

I Manoli, et al. (2005) NCBI: NBK1231

Penetrance (Includes any high-risk racial or ethnic subgroups)

Unknown
Information on penetrance was not available.
Tier Not provided

Relative Risk (Includes any high-risk racial or ethnic subgroups)

Unknown
Information on relative risk was not available.

Expressivity

Clinical presentation of methylmalonic aciduria can vary and may present with severe manifestations during the neonatal period or as an atypical or “benign” form with onset during adulthood with mild clinical outcomes.
Tier 4 View Citations

I Manoli, et al. (2005) NCBI: NBK1231

Description of sources of evidence:

Tier 1: Evidence from a systematic review or a meta-analysis or clinical practice guideline clearly based on a systematic review.
Tier 2: Evidence from clinical practice guidelines or broad-based expert consensus with non-systematic evidence review.
Tier 3: Evidence from another source with non-systematic review of evidence with primary literature cited.
Tier 4: Evidence from another source with non-systematic review of evidence with no citations to primary data sources.
Tier 5: Evidence from a non-systematically identified source.

Patient Management

To establish the extent of disease in an individual diagnosed with isolated MMA, the following evaluations are recommended:

- serum chemistry panel (Na , K , CI , glucose, urea, creatinine, AST, ALT, alkaline phosphatase, bilirubin [T/U], triglycerides, and cholesterol)

- complete blood count with differential

- arterial or venous blood gas

- plasma ammonium concentration

- formal urinalysis

- quantitative plasma amino acids

- urine organic acid analysis by gas chromatography and mass spectrometry (GC-MS)

- if possible, measurement of plasma concentrations of methylmalonic acid, methylcitrate, free and total carnitine, and an acylcarnitine profile to document propionylcarnitine (C3 species) concentration.

Tier 4 View Citations

I Manoli, et al. (2005) NCBI: NBK1231

Nutritional management should include a low-protein, high-calorie diet.
Tier 4 View Citations

I Manoli, et al. (2005) NCBI: NBK1231

Patients who are vitamin B12 responsive, should be administered hydroxocobalamin injections every day to every other day. This regimen should be adjusted for the patient’s age and weight.
Tier 4 View Citations

I Manoli, et al. (2005) NCBI: NBK1231

Carnitine can be given daily as a dietary supplement to increase intracellular CoA pools and enhance the excretion of propionylcarnitine.
Tier 4 View Citations

I Manoli, et al. (2005) NCBI: NBK1231

Antibiotics can be used to reduce the production of proprionate from gut flora, though the recommended types, dosage, frequency may vary
Tier 4 View Citations

I Manoli, et al. (2005) NCBI: NBK1231

Medic Alert bracelets allow for easily accessed detailed emergency treatment protocols to

facilitate care in the event of an episode
Tier 4 View Citations

I Manoli, et al. (2005) NCBI: NBK1231

Surveillance

Information on surveillance was not identified.

Circumstances to Avoid

Patients are recommended to avoid fasting and increased dietary protein and to regulate their stress.
Tier 4 View Citations

I Manoli, et al. (2005) NCBI: NBK1231

Description of sources of evidence:

Tier 1: Evidence from a systematic review or a meta-analysis or clinical practice guideline clearly based on a systematic review.
Tier 2: Evidence from clinical practice guidelines or broad-based expert consensus with non-systematic evidence review.
Tier 3: Evidence from another source with non-systematic review of evidence with primary literature cited.
Tier 4: Evidence from another source with non-systematic review of evidence with no citations to primary data sources.
Tier 5: Evidence from a non-systematically identified source.

Nature of Intervention

Identified interventions include Medic Alert bracelets, B12 administration, avoidance of fasting and increased dietary protein, and stress regulation.
Context: Adult

Chance to Escape Clinical Detection

Without newborn screening, an individual with the adult onset form would likely escape detection prior to their first episode.
Context: Adult
Tier 4 View Citations

I Manoli, et al. (2005) NCBI: NBK1231

Description of sources of evidence:

Tier 1: Evidence from a systematic review or a meta-analysis or clinical practice guideline clearly based on a systematic review.
Tier 2: Evidence from clinical practice guidelines or broad-based expert consensus with non-systematic evidence review.
Tier 3: Evidence from another source with non-systematic review of evidence with primary literature cited.
Tier 4: Evidence from another source with non-systematic review of evidence with no citations to primary data sources.
Tier 5: Evidence from a non-systematically identified source.
Gene Condition Associations
OMIM Identifier Primary MONDO Identifier Additional MONDO Identifiers

References List

I Manoli, JL Sloan, CP Venditti. Isolated Methylmalonic Acidemia. (2005) [Updated Jan 07 2016]. In: RA Pagon, MP Adam, HH Ardinger, et al., editors. GeneReviews® [Internet]. Seattle (WA): University of Washington, Seattle; 1993-2026. Available from: https://www.ncbi.nlm.nih.gov/books/NBK1231/

Methylmalonic acidemia without homocystinuria. Orphanet encyclopedia, http://www.orpha.net/consor/cgi-bin/OC_Exp.php?lng=en&Expert=293355

Early Rule-Out Summary

This topic passed the early rule out stage

Findings of Early Rule-Out Assessment

  1. Is there a qualifying resource, such as a practice guideline or systematic review, for the genetic condition?
  2. Does the practice guideline or systematic review indicate that the result is actionable in one or more of the following ways?
  3. a. Patient Management

    b. Surveillance or Screening

    c. Circumstances to Avoid

  4. Is it actionable in an undiagnosed adult with the condition?
  5. Is this condition an important health problem?
  6. Is there at least on known pathogenic variant with at least moderate penetrance (≥40%) or moderate relative risk (≥2) in any population?