{
  "@context": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/context/doc",
  "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091",
  "id": "CG-AC:AC091",
  "type": "ClinicalActionabilityReport",
  "metadata": {
    "schemaLabel": "AC-Sepio.Beta-1 (Unofficial)",
    "contentVersionId": "27056",
    "producedAtUTC": "Sat, 12 Sep 2026 00:55:55 -0000",
    "note": "DISCLAIMER: The SEPIO-inspired schema presented here is an initial prototype for Clinical Actionability curation summaries and has not been reviewed nor finalized by the ClinGen Data Exchange Modeling Team. We expect it to differ significantly from the final schema."
  },
  "description": "JSON-LD representation of ClinGen Actionability Stage 2 report modeled with SEPIO. The hierarchically structured document will include:\n1. Contextual & topic information, such as the **conditions/diseases** and the **genes**.\n2. Categorized **evidence narratives**, with references.\n\t* This content corresponds to the texts within the *Actionability Summary Report*\n4. **Outcome & Intervention** pairs, with **consensus scoring** in 5 dimensions:\n\t1. Outcome Severity\n\t2. Outcome Likelihood\n\t3. Intervention Effectiveness\n\t4. Nature of the Intervention\n\t5. Total (Overall) Score\n\n*( Note: The summary report does not include the **Screening Survey** which led to preparation of the actionability report. )",
  "condition": {
    "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/co",
    "id": "CG-AC:AC091/co",
    "type": "GeneticCondition",
    "label": "Familial papillary renal cell carcinoma 1"
  },
  "outcome": [
    {
      "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/ou/Morbidity%2Fmortality%20associated%20with%20papillary%20renal%20cell%20carcinoma",
      "id": "CG-AC:AC091/ou/Morbidity/mortality associated with papillary renal cell carcinoma",
      "type": "Outcome",
      "label": "Morbidity/mortality associated with papillary renal cell carcinoma"
    }
  ],
  "intervention": [
    {
      "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/intv/Periodic%20surveillance%20via%20renal%20CT%20imaging",
      "id": "CG-AC:AC091/intv/Periodic surveillance via renal CT imaging",
      "type": "Intervention",
      "label": "Periodic surveillance via renal CT imaging"
    }
  ],
  "clinicalActionabilityProfile": {
    "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/cap",
    "id": "CG-AC:AC091/cap",
    "type": "Assertion",
    "assertionMethod": "The ClinGen AWG developed a standardized protocol to generate evidence-based profiles of clinical actionability of genes and associated disorders in the form of summary reports and semiquantitative metric (SQM) scores.",
    "releaseDate": "Wed, 09 Feb 2022 00:00:00 -0000",
    "releaseNum": "1.2.2",
    "media": "call"
  },
  "evidenceStatements": {
    "evidenceNarratives": [
      {
        "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/en/ACMI2603",
        "id": "CG-AC:AC091/en/ACMI2603",
        "type": "EvidenceNarrative",
        "narrative": "Autosomal Dominant",
        "evidenceDomainTag": "Threat Materialization Chances.Modes of Inheritance"
      },
      {
        "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/en/nh",
        "id": "CG-AC:AC091/en/nh",
        "type": "EvidenceNarrative",
        "narrative": "FPRCC has late onset, typically between ages 50 and 70 years.  A study of 10 families with FPRCC reported that the average age of diagnosis of affected individuals in these families was 45, with an estimated mean survival of 7 years following diagnosis. Although 5-year survival rates for patients with RCC have improved in recent years, the outcome for patients with advanced stage disease remains poor.",
        "evidenceDomainTag": "Nature of the Threat.Natural History",
        "publication": [
          "CG-AC:RF000411",
          "CG-AC:RF000412",
          "CG-AC:RF000257"
        ]
      },
      {
        "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/en/potgd",
        "id": "CG-AC:AC091/en/potgd",
        "type": "EvidenceNarrative",
        "narrative": "The incidence of familial papillary renal cell carcinoma (FPRCC) is unknown. However, the annual incidence of all familial renal cell carcinoma (RCC) syndromes is less than 1 in 1,500,000.",
        "evidenceDomainTag": "Nature of the Threat.Prevalence of the Genetic Disorder",
        "publication": [
          "CG-AC:RF000411",
          "CG-AC:RF000257"
        ]
      },
      {
        "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/en/cf",
        "id": "CG-AC:AC091/en/cf",
        "type": "EvidenceNarrative",
        "narrative": "FPRCC is characterized by a predisposition for developing multiple bilateral papillary RCCs.  Patients may develop 1100-3400 microscopic tumors in a single kidney. The types of papillary tumors range from microscopic lesions to clinically symptomatic carcinomas. However, tumors are always type 1 papillary RCC with low nuclear grade.  However, some tumors do metastasize.",
        "evidenceDomainTag": "Nature of the Threat.Clinical Features",
        "publication": [
          "CG-AC:RF000411",
          "CG-AC:RF000412",
          "CG-AC:RF000257"
        ]
      }
    ],
    "tieredEvidenceNarratives": [
      {
        "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/ten/CDEC2732",
        "id": "CG-AC:AC091/ten/CDEC2732",
        "type": "TieredEvidenceNarrative",
        "evidenceSourceTier": "3",
        "narrative": "In a study of 10 families with FPRCC reported that RCC was often detected incidentally in asymptomatic individuals or during screening of asymptomatic members of RCC families.",
        "evidenceDomainTag": "Condition Escape Detection.Chances to Escape Clinical Detection",
        "publication": [
          "CG-AC:RF000412"
        ]
      },
      {
        "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/ten/NOI2739",
        "id": "CG-AC:AC091/ten/NOI2739",
        "type": "TieredEvidenceNarrative",
        "narrative": "Interventions identified in this report include surveillance with CT scans and treatment with nephron-sparing surgery. Surgical mortality of partial nephrectomy is less than 1% at experienced centers. A study of 50 patients with hereditary RCC who underwent 65 partial nephrectomies indicated the most common complications were pneumothorax (4.2%), renal atrophy (4.6%), prolonged urinal drainage (4.6%), and perinephric abscess (1.5%).",
        "evidenceDomainTag": "Acceptability of Intervention.Natures of Intervention",
        "publication": [
          "CG-AC:RF000414",
          "CG-AC:RF000415"
        ]
      },
      {
        "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/ten/ACPE3804",
        "id": "CG-AC:AC091/ten/ACPE3804",
        "type": "TieredEvidenceNarrative",
        "evidenceSourceTier": "3",
        "narrative": "FPRCC is associated with high penetrance with a 90% likelihood of developing RCC by age 80.",
        "evidenceDomainTag": "Threat Materialization Chances.Penetrances",
        "publication": [
          "CG-AC:RF000257"
        ]
      },
      {
        "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/ten/PGM2682",
        "id": "CG-AC:AC091/ten/PGM2682",
        "type": "TieredEvidenceNarrative",
        "evidenceSourceTier": "Not provided",
        "evidenceDomainTag": "Threat Materialization Chances.Prevalences of the Genetic Mutation"
      }
    ],
    "tieredRecommendations": [
      {
        "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/tr/ACSU3494",
        "id": "CG-AC:AC091/tr/ACSU3494",
        "type": "TieredRecommendation",
        "evidenceSourceTier": "3",
        "recommendation": "Imaging is often difficult due to the small size of lesions and their hypovascularity. In this context, CT is the imaging modality of choice for FPRCC patient screening. Surveillance should be started at age 30-35 and/or 10 years before the earlier age or onset of an RCC in the family. The frequency of surveillance can range from every 3-6 months to every 2-3 years depending on the size of the lesions.",
        "evidenceDomainTag": "Effectiveness of Intervention.Surveillances",
        "publication": [
          "CG-AC:RF000257"
        ]
      },
      {
        "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/tr/REC2797",
        "id": "CG-AC:AC091/tr/REC2797",
        "type": "TieredRecommendation",
        "evidenceSourceTier": "3",
        "recommendation": "Partial nephrectomy (PN), also known as nephron-sparing surgery is now the standard method of hereditary RCC treatment. Bilateral nephrectomy eliminates the risk of metastasis from RCC but requires renal replacement therapy, including dialysis and kidney transplantation. However, the significant morbidity, mortality, and effects on quality of life, associated with dialysis makes this form of renal replacement therapy a last resort. In addition, options for kidney transplantation in hereditary patients may be limited due to the presence of RCC or other co-morbidities. Evidence for effectiveness of PN compared to bilateral nephrectomy among patients with FPRCC specifically was not available. However, available evidence suggest promising overall survival outcome for the PN intervention in hereditary RCC cases. One study assessed a cohort of 58 patients with hereditary RCC treated with PN for solid tumors greater than 4cm. The cohort which included 41 (71%) patients with von Hippel-Lindau, 10 (17%) patients with Birt-Hogg-Dube, and 7 (11%) with FPRCC. The mean age was 43.7 (range 18–63) and the mean largest tumor size was 5.3 cm (range 4–13). The mean number of resected kidney tumors was 6.4 (range 1–44). Overall survival of the cohort was 93% and metastasis-free survival was 96.5% at the median follow up of 45 months (range 2–163), rates similar to those reported in the literature series for patients undergoing PN for tumors in the sporadic population.",
        "evidenceDomainTag": "Effectiveness of Intervention.Patient Managements",
        "publication": [
          "CG-AC:RF000257"
        ]
      },
      {
        "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/tr/ACPM5128",
        "id": "CG-AC:AC091/tr/ACPM5128",
        "type": "TieredRecommendation",
        "evidenceSourceTier": "5",
        "recommendation": "Treatment aims at controlling the risk of advanced disease, including metastasis, while at the same time preserving renal function due to the high likelihood of future de novo RCC. Sporadic and certain types of hereditary RCC usually acquire metastatic potential when their size reaches >3-7 cm. For some forms of hereditary RCC (such as FPRCC, von Hippel-Lindau syndrome, and Birt-Hogg Dube syndrome), the standard recommendation is the removal of all lesions in the same kidney once a single solid lesion or the largest solid is >3cm (the “3cm rule”), while other hereditary forms (such as hereditary leiomyomatosis and renal cell cancer and SDH-associated tumors) require more aggressive surgery due to a more aggressive nature with metastatic potential at smaller tumor size.",
        "evidenceDomainTag": "Effectiveness of Intervention.Patient Managements",
        "publication": [
          "CG-AC:RF000413"
        ]
      }
    ]
  },
  "evidenceCategory": {
    "outcomeEvidenceItem": {
      "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/oei",
      "id": "CG-AC:AC091/oei",
      "type": "EvidenceItem",
      "natureOfTheThreat": {
        "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/oei/nott",
        "id": "CG-AC:AC091/oei/nott",
        "type": "EvidenceLine",
        "prevalenceOfTheGeneticDisorder": {
          "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/oei/pgd",
          "id": "CG-AC:AC091/oei/pgd",
          "type": "EvidenceItem",
          "keyText": "< 1-2 in 100000",
          "sourceOfPopulation": "General population",
          "evidenceNarrative": {
            "@id": "CG-AC:AC091/en/potgd"
          }
        },
        "clinicalFeatures": {
          "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/oei/cf",
          "id": "CG-AC:AC091/oei/cf",
          "type": "EvidenceItem",
          "evidenceNarrative": {
            "@id": "CG-AC:AC091/en/cf"
          }
        },
        "naturalHistory": {
          "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/oei/nh",
          "id": "CG-AC:AC091/oei/nh",
          "type": "EvidenceItem",
          "evidenceNarrative": {
            "@id": "CG-AC:AC091/en/nh"
          }
        }
      },
      "threatMaterializationChances": {
        "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/oei/tmc",
        "id": "CG-AC:AC091/oei/tmc",
        "type": "EvidenceLine",
        "modeOfInheritance": {
          "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/oei/moi",
          "id": "CG-AC:AC091/oei/moi",
          "type": "EvidenceItem",
          "keyText": "Autosomal Dominant",
          "evidenceNarrative": {
            "@id": "CG-AC:AC091/en/ACMI2603"
          }
        },
        "prevalenceOfTheGeneticMutation": {
          "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/oei/pgm",
          "id": "CG-AC:AC091/oei/pgm",
          "type": "EvidenceItem",
          "keyText": "Unknown",
          "sourceOfPopulation": "General population",
          "tieredEvidenceNarrative": {
            "@id": "CG-AC:AC091/ten/PGM2682"
          }
        },
        "penetrance": [
          {
            "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/oei/pe/ACPE3804",
            "id": "CG-AC:AC091/oei/pe/ACPE3804",
            "type": "EvidenceItem",
            "keyText": ">= 40 %",
            "tieredEvidenceNarrative": {
              "@id": "CG-AC:AC091/ten/ACPE3804"
            }
          }
        ]
      }
    },
    "interventionEvidenceItem": {
      "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/iei",
      "id": "CG-AC:AC091/iei",
      "type": "EvidenceItem",
      "acceptabilityOfIntervention": {
        "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/iei/aoi",
        "id": "CG-AC:AC091/iei/aoi",
        "type": "EvidenceLine",
        "natureOfIntervention": [
          {
            "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/iei/noi/NOI2739",
            "id": "CG-AC:AC091/iei/noi/NOI2739",
            "type": "EvidenceItem",
            "tieredEvidenceNarrative": {
              "@id": "CG-AC:AC091/ten/NOI2739"
            }
          }
        ]
      },
      "effectivenessOfIntervention": {
        "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/iei/eoi",
        "id": "CG-AC:AC091/iei/eoi",
        "type": "EvidenceLine",
        "patientManagement": [
          {
            "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/iei/pm/ACPM5128",
            "id": "CG-AC:AC091/iei/pm/ACPM5128",
            "type": "EvidenceItem",
            "tieredRecommendation": {
              "@id": "CG-AC:AC091/tr/ACPM5128"
            }
          },
          {
            "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/iei/pm/REC2797",
            "id": "CG-AC:AC091/iei/pm/REC2797",
            "type": "EvidenceItem",
            "tieredRecommendation": {
              "@id": "CG-AC:AC091/tr/REC2797"
            }
          }
        ],
        "surveillance": [
          {
            "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/iei/su/ACSU3494",
            "id": "CG-AC:AC091/iei/su/ACSU3494",
            "type": "EvidenceItem",
            "tieredRecommendation": {
              "@id": "CG-AC:AC091/tr/ACSU3494"
            }
          }
        ]
      },
      "conditionEscapeDetection": {
        "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/iei/ced",
        "id": "CG-AC:AC091/iei/ced",
        "type": "EvidenceLine",
        "chanceToEscapeDetection": [
          {
            "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/AC091/iei/cted/CDEC2732",
            "id": "CG-AC:AC091/iei/cted/CDEC2732",
            "type": "EvidenceItem",
            "tieredEvidenceNarrative": {
              "@id": "CG-AC:AC091/ten/CDEC2732"
            }
          }
        ]
      }
    }
  },
  "references": [
    {
      "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/RF000257",
      "id": "CG-AC:RF000257",
      "type": "Publication",
      "publicationType": "PMID",
      "citation": "Verine J, Pluvinage A, Bousquet G, Lehmann-Che J, de Bazelaire C, Soufir N, Mongiat-Artus P. Hereditary renal cancer syndromes: an update of a systematic review. Eur Urol. (2010) 58(5):701-10.",
      "webUrl": "https://www.ncbi.nlm.nih.gov/pubmed/?term=20817385",
      "xdbref": [
        "PMID:20817385"
      ]
    },
    {
      "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/RF000411",
      "id": "CG-AC:RF000411",
      "type": "Publication",
      "publicationType": "Orphanet",
      "citation": "Hereditary papillary renal cell carcinoma. Orphanet encyclopedia [Internet]",
      "xdbref": [
        "Orphanet:47044"
      ]
    },
    {
      "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/RF000412",
      "id": "CG-AC:RF000412",
      "type": "Publication",
      "publicationType": "OMIM",
      "citation": "Online Medelian Inheritance in Man, OMIM. Johns Hopkins University, Baltimore, MD. Renal cell carcinoma, papillary, 1; rccp1. MIM: 6050742016 Oct 03. ",
      "webUrl": "https://www.omim.org/entry/605074",
      "xdbref": [
        "OMIM:605074"
      ]
    },
    {
      "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/RF000413",
      "id": "CG-AC:RF000413",
      "type": "Publication",
      "publicationType": "PMID",
      "citation": "Metwalli AR, Linehan WM. Nephron-sparing surgery for multifocal and hereditary renal tumors. Curr Opin Urol. (2014) 24(5):466-73.",
      "webUrl": "https://www.ncbi.nlm.nih.gov/pubmed/?term=25014245",
      "xdbref": [
        "PMID:25014245"
      ]
    },
    {
      "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/RF000414",
      "id": "CG-AC:RF000414",
      "type": "Publication",
      "publicationType": "Other",
      "citation": "true. Renal cancer. (2016) ",
      "webUrl": "http://www.startoncology.net/professional%ADarea/renal%ADcancer/?lang=en"
    },
    {
      "@id": "https://actionability.clinicalgenome.org/ac/Adult/api/sepio/doc/RF000415",
      "id": "CG-AC:RF000415",
      "type": "Publication",
      "publicationType": "PMID",
      "citation": "Herring JC, Enquist EG, Chernoff A, Linehan WM, Choyke PL, Walther MM. Parenchymal sparing surgery in patients with hereditary renal cell carcinoma: 10-year experience. J Urol. (2001) 165(3):777-81.",
      "webUrl": "https://www.ncbi.nlm.nih.gov/pubmed/?term=11176466",
      "xdbref": [
        "PMID:11176466"
      ]
    }
  ]
}